USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: H2B1M_HUMAN USC-OGP 2-DE database:  H2B1M_HUMAN H2B1M_HUMAN General information about the entry View entry in simple text format Entry name H2B1M_HUMAN Primary accession number Q99879 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2B type 1-M; AltName: Full=Histone H2B.e; Short=H2B/e;. Gene name Name=HIST1H2BM Synonyms=H2BFE Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1329: pI=4.39; Mw=16914 Cross-references UniProtKB/Swiss-Prot Q99879; H2B1M_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2B1M_HUMAN Primary accession number Q99879 Secondary accession number(s) Q6NWQ3 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 162) Name and origin of the protein Description RecName: Full=Histone H2B type 1-M; AltName: Full=Histone H2B.e; Short=H2B/e; Gene name Name=HIST1H2BM Synonyms=H2BFE Encoded on Name=HIST1H2BM; Synonyms=H2BFE Keywords Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Glycoprotein; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Z83738; CAB06033.1; -; Genomic_DNA EMBL AF531296; AAN06696.1; -; Genomic_DNA EMBL AL049822; CAB81655.1; -; Genomic_DNA EMBL BC066244; AAH66244.1; -; mRNA EMBL BC067486; AAH67486.1; -; mRNA EMBL BC067487; AAH67487.1; -; mRNA EMBL BC067488; AAH67488.1; -; mRNA EMBL BC067489; AAH67489.1; -; mRNA CCDS CCDS4629.1; -; . RefSeq NP_003512.1; NM_003521.2; . UniGene Hs.182432; -; . ProteinModelPortal Q99879; -; . SMR Q99879; -; . BioGrid 113938; 14; . IntAct Q99879; 8; . MINT MINT-3060064; -; . STRING 9606.ENSP00000352442; -; . iPTMnet Q99879; -; . PhosphoSitePlus Q99879; -; . SwissPalm Q99879; -; . BioMuta HIST1H2BM; -; . DMDM 7387742; -; . EPD Q99879; -; . MaxQB Q99879; -; . PaxDb Q99879; -; . PeptideAtlas Q99879; -; . PRIDE Q99879; -; . TopDownProteomics Q99879; -; . Ensembl ENST00000621112; ENSP00000477907; ENSG00000273703; . GeneID 8342; -; . KEGG hsa:8342; -; . UCSC uc003njo.4; human; . CTD 8342; -; . DisGeNET 8342; -; . GeneCards HIST1H2BM; -; . HGNC HGNC:4750; HIST1H2BM; . HPA HPA042205; -; . HPA HPA043013; -; . HPA HPA048671; -; . MIM 602802; gene; . neXtProt NX_Q99879; -; . OpenTargets ENSG00000273703; -; . PharmGKB PA29125; -; . eggNOG KOG1744; Eukaryota; . eggNOG ENOG4111NV5; LUCA; . GeneTree ENSGT00760000118976; -; . HOGENOM HOG000231213; -; . HOVERGEN HBG007774; -; . InParanoid Q99879; -; . KO K11252; -; . OMA ANFMAVQ; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB Q99879; -; . TreeFam TF300212; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5693565; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks; . Reactome R-HSA-5693571; Nonhomologous End-Joining (NHEJ); . Reactome R-HSA-5693607; Processing of DNA double-strand break ends; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-69473; G2/M DNA damage checkpoint; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-8866654; E3 ubiquitin ligases ubiquitinate target proteins; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . GeneWiki HIST1H2BM; -; . GenomeRNAi 8342; -; . PRO PR:Q99879; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000196374; -; . CleanEx HS_HIST1H2BM; -; . Genevisible Q99879; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0000786; C:nucleosome; NAS:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; NAS:UniProtKB; . GO GO:0006334; P:nucleosome assembly; NAS:UniProtKB; . GO GO:0016567; P:protein ubiquitination; TAS:Reactome; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR000558; Histone_H2B; . PANTHER PTHR23428; PTHR23428; 1; . Pfam PF00125; Histone; 1; . PRINTS PR00621; HISTONEH2B; . SMART SM00427; H2B; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00357; HISTONE_H2B; 1; .

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